Content
- Related proteins
- Ortholog cluster
- Related non-plant proteins
ARAMEMNON release 6.2
© Flügge Lab
Botanical Institute
University of Cologne
What it is
ARAMEMNON is a database about all putative membrane proteins of
- Thale Cress (Arabidopsis thaliana)
- Rice (Oryza sativa)
- Grape (Vitis vinifera)
- Maize (Zea mays)
and about some 4000 putative membrane proteins of ~300 other seed plants.
ARAMEMNON stores data about:
- protein, cDNA and genomic sequences
- exon predictions
- different cDNA/protein models of genes (A.thaliana and O.sativa)
- ontology terms according to the Gene Ontology (GO) Consortium
- conserved domains as predictable by using the PFAM database
- transporter classification as predictable by using the TC-system
- bibliographic references
- predictions for transmembrane spanning proteins
- predictions for membrane-anchored proteins (GPI-attachment, prenylation, myristoylation)
- prediction of the subcellular location
- consensus predictions (transmembrane alpha helices, subcellular location)
- isospecic homologous protein sequences('paralogs')
- heterospecic clusters of protein sequences